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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_164823_166974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

164823 - 166974

Intron Length:

2152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

CGGTGCTGAGCC

Flanking Amino Acid:

SRLDHAEVFRNSLGLIYTIY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

82.8

0.74

0.7

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

-0.4

2.1

51.8

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029465

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017547

153395 - 171950

18556