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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_28795_30402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28795 - 30402

Intron Length:

1608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAGAC

U12 Branch Point Sequence:

GTCCCCAGACGT

Flanking Amino Acid:

TLNLTAPGTQDSLNNNGSYP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

76.4

32.8

Major BPS

45.8

-0.2

37.9

30.5

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

28.3

-2.5

3.6

40.1

46.3

Minor BPS

39.7

-0.7

2.1

56.09

45.5

Associated Gene:

Gene:

MAPK8IP2

Ensembl Gene ID:

ENSAPLG00000016794

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039422

22813 - 30744

7932

ENSAPLT00000036782

23991 - 30744

6754

ENSAPLT00000022979

22813 - 32715

9903

ENSAPLT00000022818

22813 - 31962

9150