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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_82049_82179_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82049 - 82179

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GGCGTGCCCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGTGAG

U12 Branch Point Sequence:

GAGTGTGGGACT

Flanking Amino Acid:

QVGQVFLYFQWDSLLLEAGF

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

45.9

-0.2

1.7

42.8

49.4

Major PPT

55.7

0.13

0.9

50.7

39.4

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

38.2

-0.8

2.3

52.7

42.6

Associated Gene:

Gene:

LMF2

Ensembl Gene ID:

ENSAPLG00000030707

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027296

78479 - 85836

7358

ENSAPLT00000019887

78479 - 85836

7358

ENSAPLT00000019600

78479 - 85836

7358