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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_122479_123773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

122479 - 123773

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACGAT

U12 Branch Point Sequence:

CTAACGATACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

74.9

Major BPS

54.2

0.11

1.3

52.8

42.7

Major PPT

72.7

0.51

0.8

69.1

31.4

Minor 5ss

31.1

-2.2

3.1

31.2

42.7

Minor BPS

38.6

-0.8

2.3

48.44

41.7

Associated Gene:

Gene:

LPAR2

Ensembl Gene ID:

ENSAPLG00000012802

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013322

116179 - 123880

7702