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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_179743_179824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179743 - 179824

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CTCCCCTGAGCG

Flanking Amino Acid:

HPESTSGAYEAQLLPRLPGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

0.38

0.9

60.2

35.4

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

48.3

-0.2

1.8

53.75

46.7

Associated Gene:

Gene:

PGLS

Ensembl Gene ID:

ENSAPLG00000011844

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012317

179479 - 181497

2019