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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_181144_181359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181144 - 181359

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCGGG

5'SS Class:

major

3'SS Sequence:

TTTCTTCCGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAA

U12 Branch Point Sequence:

CCTCGCTGAAAC

Flanking Amino Acid:

TGGGKAAVLKRILEGSEQNP

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.3

49.1

47.6

Major BPS

54.6

0.12

1.1

46.7

38.9

Major PPT

79.8

0.67

0.9

76.8

Minor 5ss

40.2

-1.1

3.5

48.2

Minor BPS

45.4

-0.3

53.84

43.6

Associated Gene:

Gene:

PGLS

Ensembl Gene ID:

ENSAPLG00000011844

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012317

179479 - 181497

2019