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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_28959_29279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28959 - 29279

Intron Length:

321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

CCCTCCTGATCC

Flanking Amino Acid:

LAIINSFAKQNFVMFRTRNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.9

36.4

Major BPS

78.8

0.71

67.6

40.6

Major PPT

71.9

0.49

0.9

64.9

30.7

Minor 5ss

32.9

-2

3.2

43.7

Minor BPS

50.6

-0

1.8

58.6

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014336

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014929

27329 - 29735

2407

ENSAPLT00000034288

28111 - 29735

1625