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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_62518_62909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62518 - 62909

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

GCTTCTCAAAGT

Flanking Amino Acid:

KMGNKPYMIQVYRNRKWRPI

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

93.3

0.97

0.6

89.3

19.4

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

45.1

-0.2

2.2

64.66

45.9

Associated Gene:

Gene:

ATP13A1

Ensembl Gene ID:

ENSAPLG00000013387

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013992

59681 - 75078

15398