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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_68657_69181_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
68657 - 69181

Intron Length:
525

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACACCTC

5'SS Class:
major

3'SS Sequence:
TTTGCTTTGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTGAT

U12 Branch Point Sequence:
GGTTACTGATTT

Flanking Amino Acid:
KELGHLTHQQVREMKREALE

Intron Amino Acid Position:
850

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.9
0.47
1.1
60.6
44.4

Major BPS
83.5
0.83
0.8
71.6
36.4

Major PPT
79.4
0.66
1
76.8
37.3

Minor 5ss
40.7
-1
3.4
59.2
45.5

Minor BPS
48.4
-0
1.9
67.89
42.5

Associated Gene:

Gene:
ATP13A1

Ensembl Gene ID:

Chromosome:
PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59681 - 75078
15398