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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_70996_71391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70996 - 71391

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAC

U12 Branch Point Sequence:

TTCTCCCTACAG

Flanking Amino Acid:

DVGALKHADVGVALLANAPE

Intron Amino Acid Position:

1027

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

74.7

0.62

1.1

65.7

Major PPT

84.4

0.77

0.8

81.2

36.5

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

48.5

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

ATP13A1

Ensembl Gene ID:

ENSAPLG00000013387

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013992

59681 - 75078

15398