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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_82866_83192_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
82866 - 83192

Intron Length:
327

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAAGGACT

5'SS Class:
major

3'SS Sequence:
TTCTCTGCTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTATAT

U12 Branch Point Sequence:
ATCTCTGTATAT

Flanking Amino Acid:
TLRSCIEKTEMASLDSVSDE

Intron Amino Acid Position:
202

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
78.1
35.9

Major BPS
64.1
0.35
1.2
61
45.5

Major PPT
78.7
0.65
0.8
77.4
31.4

Minor 5ss
37.3
-1.4
3.3
54.7
42.4

Minor BPS
45.7
-0.2
2.2
66.96
44.1

Associated Gene:

Gene:
DSN1

Ensembl Gene ID:

Chromosome:
PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

81964 - 86443
4480

81964 - 86443
4480

81964 - 85984
4021