Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_84876_84977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84876 - 84977

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

AGCGTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

ACGAGCTTGACC

Flanking Amino Acid:

LAGTAEPARCRSEEMPQETS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.2

Major BPS

56.2

0.15

1.3

44.3

Major PPT

73.1

0.52

65.7

40.4

Minor 5ss

-2.5

3.1

35.2

41.4

Minor BPS

49.2

-0

1.9

56.34

42.6

Associated Gene:

Gene:

DSN1

Ensembl Gene ID:

ENSAPLG00000012996

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036518

81964 - 86443

4480

ENSAPLT00000013539

81964 - 85984

4021