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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012260.1_87165_87356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87165 - 87356

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATCACAA

Flanking Amino Acid:

QANSPSTPNSASSGSFKMTN

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

0.62

1.4

85.7

34.9

Major PPT

85.4

0.8

0.9

91.3

20.9

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

44.2

-0.4

2.2

62.17

43.6

Associated Gene:

Gene:

PBX4

Ensembl Gene ID:

ENSAPLG00000012834

Chromosome:

PEDO01012260.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013379

85165 - 96167

11003