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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012290.1_4822_5306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4822 - 5306

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

GCGAGCTAAAGG

Flanking Amino Acid:

RKWQKYCKASRIFGFVAKNQ

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

35.5

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

80.2

0.68

0.7

72.9

Minor 5ss

-1.2

3.4

56.7

47.6

Minor BPS

-1

2.2

35.91

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016595

Chromosome:

PEDO01012290.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040850

21 - 6397

6377