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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012321.1_621_709_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
621 - 709

Intron Length:
89

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGTGCC

5'SS Class:
strong_major

3'SS Sequence:
GTCCCCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACCCAC

U12 Branch Point Sequence:
CAGCCCCCACCC

Flanking Amino Acid:
MKVLGNPKSDEMNLKTLNFE

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
0.9
71.1
32.7

Major BPS
46.9
-0.1
1.1
53.7
32.6

Major PPT
68.8
0.42
0.8
61.8
28.9

Minor 5ss
28.6
-2.4
3
32.8
35.9

Minor BPS
40.3
-0.7
2
46.1
42.2

Associated Gene:

Gene:
MYL6

Ensembl Gene ID:

Chromosome:
PEDO01012321.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3 - 779
777