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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012321.1_8_282_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8 - 282

Intron Length:
275

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGCGCC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTAAGCAAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TTCTTTTTAAGC

Flanking Amino Acid:
EDSNGCINYEEK

Intron Amino Acid Position:
108

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84
0.8
0.9
69.3
35.8

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
63.4
0.3
1.2
64.8
39.5

Minor 5ss
32.2
-2
3.3
41.8
45.1

Minor BPS
65.6
0.47
1.6
72.92
38.9

Associated Gene:

Gene:
MYL6

Ensembl Gene ID:

Chromosome:
PEDO01012321.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3 - 779
777