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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012348.1_1574_1662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1574 - 1662

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CAGCCCCCACCC

Flanking Amino Acid:

RALISGYFLKVARDIDGSGN

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

70.5

0.46

0.8

35.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

40.3

-0.7

46.1

42.2

Associated Gene:

Gene:

DQX1

Ensembl Gene ID:

ENSAPLG00000030009

Chromosome:

PEDO01012348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045166

204 - 4079

3876

ENSAPLT00000040377

204 - 6109

5906