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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012348.1_2157_2257_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2157 - 2257

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCAC

5'SS Class:

major

3'SS Sequence:

GCGCTGTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

ACGTGGTGACCT

Flanking Amino Acid:

EMVSLAAMLTVPPCFVPPST

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.3

54.3

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

63.5

0.3

53.4

41.5

Minor 5ss

42.6

-0.8

3.2

59.2

45.5

Minor BPS

-0.8

2.5

54.37

47.3

Associated Gene:

Gene:

DQX1

Ensembl Gene ID:

ENSAPLG00000030009

Chromosome:

PEDO01012348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040377

204 - 6109

5906

ENSAPLT00000045166

204 - 4079

3876