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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012348.1_2789_2868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2789 - 2868

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGTGCG

5'SS Class:

major

3'SS Sequence:

CCCCGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACGG

Flanking Amino Acid:

RMQRAAGSPQGTCLRLYSEA

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

56.9

42.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

67.4

0.39

0.8

60.5

29.4

Minor 5ss

-2.8

3.1

23.5

37.1

Minor BPS

35.8

-1.2

2.2

34.08

46.6

Associated Gene:

Gene:

DQX1

Ensembl Gene ID:

ENSAPLG00000030009

Chromosome:

PEDO01012348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040377

204 - 6109

5906