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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012348.1_4014_4305_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4014 - 4305

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

GGCACACCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CGCACACGAGCA

Flanking Amino Acid:

EDCCTTETILRYCSDEMLLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

56.5

0.15

0.9

47.3

35.5

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

35.2

-1.1

1.9

40.09

38.9

Associated Gene:

Gene:

DQX1

Ensembl Gene ID:

ENSAPLG00000030009

Chromosome:

PEDO01012348.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040377

204 - 6109

5906