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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012416.1_2548_3494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2548 - 3494

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GGGACTCTGATT

Flanking Amino Acid:

PPVASSLKRQGCNQLLDEAQ

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

0.72

38.9

Major PPT

83.7

0.76

0.7

77.7

31.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

46.1

-0.2

1.6

57.77

39.2

Associated Gene:

Gene:

C2orf42

Ensembl Gene ID:

ENSAPLG00000009949

Chromosome:

PEDO01012416.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010352

21 - 6764

6744