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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012416.1_4927_5556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4927 - 5556

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGACGG

5'SS Class:

major

3'SS Sequence:

TTTCCTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCCCCCCTAACT

Flanking Amino Acid:

AKKRLPNSTTAFVRKDALPL

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

57.5

47.2

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

0.76

0.7

31.7

Minor 5ss

30.3

-2.3

3.2

39.4

45.9

Minor BPS

56.7

0.29

1.8

69.96

46.6

Associated Gene:

Gene:

C2orf42

Ensembl Gene ID:

ENSAPLG00000009949

Chromosome:

PEDO01012416.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010352

21 - 6764

6744