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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012416.1_5658_5744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5658 - 5744

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

AGCTCCTTACCT

Flanking Amino Acid:

QVKQIFDTPELPLEITRSFI

Intron Amino Acid Position:

457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

68.9

0.47

59.6

38.6

Major PPT

69.5

0.44

1.1

65.2

41.2

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

0.64

1.6

79.07

42.9

Associated Gene:

Gene:

C2orf42

Ensembl Gene ID:

ENSAPLG00000009949

Chromosome:

PEDO01012416.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010352

21 - 6764

6744