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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012416.1_956_2227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

956 - 2227

Intron Length:

1272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

TCCTCTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

ATGATTTTAAGT

Flanking Amino Acid:

FADFLACDAGGLKGVAVPPL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

72.8

0.51

0.7

65.7

30.4

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

55.6

0.25

1.6

70.07

41.4

Associated Gene:

Gene:

C2orf42

Ensembl Gene ID:

ENSAPLG00000009949

Chromosome:

PEDO01012416.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010352

21 - 6764

6744