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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012432.1_13422_13750_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13422 - 13750

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

GGCTTTGGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAATAAA

U12 Branch Point Sequence:

CTCTCAGTACGA

Flanking Amino Acid:

GKISAAKVAEVSKKMYSMGC

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

58.5

0.21

1.1

59.9

32.5

Major PPT

56.9

0.16

1.2

52.4

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

38.6

-0.8

2.5

51.36

46.5

Associated Gene:

Gene:

FUCA1

Ensembl Gene ID:

ENSAPLG00000005504

Chromosome:

PEDO01012432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031911

6321 - 14827

8507

ENSAPLT00000020133

10032 - 14827

4796

ENSAPLT00000014032

6321 - 14827

8507

ENSAPLT00000032804

6321 - 14827

8507