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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012432.1_13940_14074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13940 - 14074

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGAAT

U12 Branch Point Sequence:

GTTTCCTGAGAA

Flanking Amino Acid:

ALANILVALQMGVSVVDASV

Intron Amino Acid Position:

637

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

49.1

-0

1.5

45.4

Major PPT

80.5

0.69

0.9

36.8

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

56.3

0.2

1.8

71.08

40.3

Associated Gene:

Gene:

FUCA1

Ensembl Gene ID:

ENSAPLG00000005504

Chromosome:

PEDO01012432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014032

6321 - 14827

8507

ENSAPLT00000032804

6321 - 14827

8507

ENSAPLT00000031911

6321 - 14827

8507

ENSAPLT00000020133

10032 - 14827

4796