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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012432.1_7222_7452_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7222 - 7452

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGCCA

5'SS Class:

major

3'SS Sequence:

TTCTATTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TGTTTTCTATTC

Flanking Amino Acid:

VGELGQALRESNIRYGLYHS

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

56.5

42.4

Major BPS

73.8

0.59

1.3

72.8

Major PPT

86.7

0.83

0.7

84.9

29.6

Minor 5ss

-2.4

3.5

39.1

46.2

Minor BPS

48.2

-0.1

1.8

62.91

37.1

Associated Gene:

Gene:

FUCA1

Ensembl Gene ID:

ENSAPLG00000005504

Chromosome:

PEDO01012432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031911

6321 - 14827

8507

ENSAPLT00000014032

6321 - 14827

8507

ENSAPLT00000005694

6321 - 12958

6638