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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012462.1_12490_12595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12490 - 12595

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

GCCCGTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAG

U12 Branch Point Sequence:

TTTGTGTTGTCC

Flanking Amino Acid:

NGPLPSPGPYRVKFLVMGCH

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

39.5

-0.6

1.5

43.7

39.4

Major PPT

64.6

0.33

0.9

57.1

33.4

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

37.5

-1

3.7

64.41

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020577

Chromosome:

PEDO01012462.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030756

10366 - 13642

3277