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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012472.1_1746_1838_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1746 - 1838

Intron Length:
93

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAACGGGG

5'SS Class:
major

3'SS Sequence:
CGTGTCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTGAG

U12 Branch Point Sequence:
CCCCCCCGAACC

Flanking Amino Acid:
IQQEMSKMFDERMAYYTSRL

Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.1
0.33
1.3
50
46.7

Major BPS
46
-0.2
1.6
40.4
42.3

Major PPT
69.3
0.43
0.9
62.1
34.8

Minor 5ss
34.6
-1.7
3.6
46.7
48.7

Minor BPS
46.6
-0.2
1.8
53.3
44

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01012472.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4608
4588