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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012472.1_3136_3275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3136 - 3275

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

TTGTCCTTGCAG

Flanking Amino Acid:

PGHPGLPGPKGDCGKPGPPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

81.3

32.8

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

31.8

-2.1

3.6

48.2

47.9

Minor BPS

43.8

-0.6

3.5

63.47

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019195

Chromosome:

PEDO01012472.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035759

21 - 4608

4588