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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012472.1_3626_3762_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3626 - 3762

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CCCCTCTGAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

75.9

0.58

0.8

69.8

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

44.9

-0.4

1.7

47.77

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019195

Chromosome:

PEDO01012472.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035759

21 - 4608

4588