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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012472.1_3835_3940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3835 - 3940

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

TTGACCTTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

67.6

0.4

0.7

60.1

22.4

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

75.2

0.78

1.2

78.76

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019195

Chromosome:

PEDO01012472.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035759

21 - 4608

4588