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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012472.1_716_889_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

716 - 889

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCCGGCGG

5'SS Class:

major

3'SS Sequence:

CCCCGGTGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGGAC

U12 Branch Point Sequence:

TGCTTGGGGACA

Flanking Amino Acid:

VGAGGGLTWGERPSSWGHPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.3

45.3

42.3

Major BPS

42.6

-0.4

1.5

34.5

43.7

Major PPT

59.5

0.21

55.7

38.9

Minor 5ss

13.7

-4.2

3.4

12.4

Minor BPS

37.7

-0.9

2.5

50.72

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025424

Chromosome:

PEDO01012472.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045145

467 - 4007

3541