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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012503.1_6004_6530_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6004 - 6530

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTGGC

5'SS Class:

major

3'SS Sequence:

GGCTCCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

CCTGCTCCAACT

Flanking Amino Acid:

AWAYFSNVDLEKDLHSGLIG

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

59.5

39.2

Major BPS

0.37

1.3

Major PPT

60.5

0.24

54.5

36.5

Minor 5ss

26.3

-2.7

3.2

31.1

Minor BPS

46.6

-0.1

64.17

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004787

Chromosome:

PEDO01012503.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004989

565 - 8257

7693