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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012517.1_1895_1997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1895 - 1997

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTCGTGTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

CAGCCCCAAATC

Flanking Amino Acid:

VAFVELELPAVPTSRGPALP

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

71.1

0.48

60.8

44.7

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

-0.4

1.9

49.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017607

Chromosome:

PEDO01012517.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019417

639 - 6005

5367