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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012517.1_2753_2960_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2753 - 2960

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTTGCCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCATAAC

U12 Branch Point Sequence:

AGCCCCATAACT

Flanking Amino Acid:

RRETIETRLPVCSARVDVRS

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

0.08

1.1

55.6

Major PPT

53.3

0.08

1.1

51.1

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

60.4

0.41

1.7

74.17

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017607

Chromosome:

PEDO01012517.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035008

1414 - 6005

4592

ENSAPLT00000019417

639 - 6005

5367