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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012517.1_3177_3308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3177 - 3308

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

TTGTGCCCCACA

Flanking Amino Acid:

LYLLPSGKCAELSIAYSSGK

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

72.6

0.51

0.9

65.6

36.2

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

41.4

-0.6

2.5

60.08

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017607

Chromosome:

PEDO01012517.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019417

639 - 6005

5367