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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012517.1_4081_4187_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4081 - 4187

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACACCAA

U12 Branch Point Sequence:

ACACCAAGAGCT

Flanking Amino Acid:

PEQLTVYPAARSLYWVNRGQ

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

44.1

-0.3

1.2

46.8

35.8

Major PPT

68.7

0.42

0.9

64.9

36.3

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

38.4

-0.8

1.9

52.69

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017607

Chromosome:

PEDO01012517.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035008

1414 - 6005

4592

ENSAPLT00000019417

639 - 6005

5367