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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012517.1_5480_5673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5480 - 5673

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCCTCCTGACAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

68.8

42.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

64.9

0.34

57.8

43.2

Minor 5ss

32.2

-2

3.1

37.3

42.5

Minor BPS

47.5

-0.1

1.9

61.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017607

Chromosome:

PEDO01012517.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019417

639 - 6005

5367