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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012521.1_1118_1403_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1118 - 1403

Intron Length:
286

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTGAGTGTT

5'SS Class:
major

3'SS Sequence:
ACTTGTGCCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACTACAC

U12 Branch Point Sequence:
TCTGCCTCTACT

Flanking Amino Acid:
RGRYREFYQCDFDIAGQFDP

Intron Amino Acid Position:
150

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.7
0.42
1.3
72.2
39.5

Major BPS
51.5
0.04
1
60.7
35.1

Major PPT
69.4
0.44
1
65.7
40.4

Minor 5ss
34.1
-1.8
3.4
44.6
43.6

Minor BPS
55.1
0.24
2
76.35
46

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01012521.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

92 - 2803
2712