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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012534.1_449_1968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

449 - 1968

Intron Length:

1520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGAGCA

5'SS Class:

major

3'SS Sequence:

TCTCCCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTCTCCTCAAAC

Flanking Amino Acid:

PEEFFTHFDARVLFCPLKEA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.34

1.3

39.3

Major BPS

73.1

0.58

73.8

32.3

Major PPT

78.5

0.64

0.7

72.8

25.3

Minor 5ss

32.6

-2

3.4

44.3

43.3

Minor BPS

67.1

0.52

1.7

76.17

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011806

Chromosome:

PEDO01012534.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030434

2 - 2222

2221