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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012538.1_602_642_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

602 - 642

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCACCCCTC

5'SS Class:

weak_major

3'SS Sequence:

CCAATTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CACCCCTCAATT

Flanking Amino Acid:

IYLGCPPMDLGMPLIYSGRV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.4

55.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

67.8

0.4

0.9

65.9

39.7

Minor 5ss

36.1

-1.6

4.3

50.3

46.4

Minor BPS

0.27

1.6

66.86

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021453

Chromosome:

PEDO01012538.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035291

37 - 1163

1127