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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012540.1_695_1055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

695 - 1055

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

AATCGCTGATTT

Flanking Amino Acid:

NILPSTVQPGDDVVSNYFTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

92.7

0.96

0.6

92.4

17.8

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

44.5

-0.3

62.19

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028100

Chromosome:

PEDO01012540.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044226

86 - 1171

1086