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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012556.1_1190_2629_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1190 - 2629

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

CTCGTGGGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAGAC

U12 Branch Point Sequence:

AGACCCAGATCC

Flanking Amino Acid:

SLQEPLLEDWRDRDKRVGGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

62.2

38.7

Major BPS

51.6

0.04

1.1

48.6

36.6

Major PPT

54.5

0.1

1.2

52.8

45.9

Minor 5ss

27.9

-2.5

27.5

37.6

Minor BPS

42.6

-0.5

1.9

50.78

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017348

Chromosome:

PEDO01012556.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025418

493 - 2676

2184