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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012569.1_3819_3955_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3819 - 3955

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGCACC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CAGGAATTAATT

Flanking Amino Acid:

GPYGLIICPSRELARQTHGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.3

57.1

42.2

Major BPS

0.82

0.8

24.9

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

37.1

-1.5

2.9

49.1

40.1

Minor BPS

46.4

-0.1

1.9

58.98

44.3

Associated Gene:

Gene:

DDX41

Ensembl Gene ID:

ENSAPLG00000015985

Chromosome:

PEDO01012569.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016698

1502 - 4585

3084