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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012580.1_633_1632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

633 - 1632

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

TGCCCGCTCACG

Flanking Amino Acid:

AHELSQRGRRDYVDALLTNY

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.4

38.7

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

76.8

0.6

0.8

69.1

Minor 5ss

28.6

-2.5

2.7

27.3

36.3

Minor BPS

38.5

-1

2.5

46.12

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023794

Chromosome:

PEDO01012580.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042764

21 - 2674

2654