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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012601.1_3272_6639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3272 - 6639

Intron Length:

3368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CAACTCCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATAAA

U12 Branch Point Sequence:

AAGACTACAACT

Flanking Amino Acid:

IKCLQNHPEHMQRGPAFPTG

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

53.7

0.09

1.1

55.9

35.8

Major PPT

0.27

34.3

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

46.4

-0.1

1.8

61.96

41.5

Associated Gene:

Gene:

GPD1

Ensembl Gene ID:

ENSAPLG00000021976

Chromosome:

PEDO01012601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026579

2847 - 9887

7041