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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012601.1_4994_6639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4994 - 6639

Intron Length:

1646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAC

U12 Branch Point Sequence:

GTTTTCTCAGCA

Flanking Amino Acid:

IKCLQNHPEHISSCVQ

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

69.1

41.9

Major BPS

56.5

0.16

1.1

34.4

Major PPT

78.7

0.64

0.9

74.9

34.7

Minor 5ss

34.5

-1.8

3.3

44.8

43.4

Minor BPS

58.3

0.26

1.8

72.34

39.5

Associated Gene:

Gene:

GPD1

Ensembl Gene ID:

ENSAPLG00000021976

Chromosome:

PEDO01012601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034966

4978 - 9887

4910