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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012601.1_7491_7805_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7491 - 7805

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACGGAT

U12 Branch Point Sequence:

CTAGCGGGAACG

Flanking Amino Acid:

DTVEICGALKNIVAVAAGFC

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

49.9

-0

1.3

49.1

Major PPT

83.6

0.76

0.8

77.5

36.5

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

37.1

-1.1

2.6

44.42

47.3

Associated Gene:

Gene:

GPD1

Ensembl Gene ID:

ENSAPLG00000021976

Chromosome:

PEDO01012601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035523

2847 - 9887

7041

ENSAPLT00000034966

4978 - 9887

4910

ENSAPLT00000026579

2847 - 9887

7041

ENSAPLT00000038385

5194 - 9887

4694