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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012601.1_7919_8844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7919 - 8844

Intron Length:

926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTTGCCTCATCA

Flanking Amino Acid:

AEEKFCETTIGCKNAQYGQI

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

68.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

76.3

0.59

0.9

75.1

34.6

Minor 5ss

33.1

-1.9

3.2

43.9

43.7

Minor BPS

58.9

0.28

1.9

75.6

41.9

Associated Gene:

Gene:

GPD1

Ensembl Gene ID:

ENSAPLG00000021976

Chromosome:

PEDO01012601.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035523

2847 - 9887

7041

ENSAPLT00000034966

4978 - 9887

4910

ENSAPLT00000026579

2847 - 9887

7041

ENSAPLT00000038385

5194 - 9887

4694